Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK3BQ9BT76 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 AC124016.1-201ENST00000609552 612 ntBASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK3BQ9BT76 AC005229.4-201ENST00000610085 2198 ntBASIC13.66□□□□□ -0.22
UPK3BQ9BT76 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 AC110285.5-201ENST00000611501 352 ntBASIC13.66□□□□□ -0.22
UPK3BQ9BT76 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 AC026471.1-201ENST00000564629 3026 ntBASIC13.66□□□□□ -0.22
UPK3BQ9BT76 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.66□□□□□ -0.22
UPK3BQ9BT76 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AC008550.1-201ENST00000511500 884 ntBASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 AL023875.1-201ENST00000640777 796 ntBASIC13.65□□□□□ -0.22
UPK3BQ9BT76 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UPK3BQ9BT76 LETM1P2-201ENST00000597330 2178 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms