Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.21■□□□□ 0.67
NPAS2Q99743 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS2Q99743 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NPAS2Q99743 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.21■□□□□ 0.67
NPAS2Q99743 KRT18P6-201ENST00000555540 1265 ntBASIC19.21■□□□□ 0.67
NPAS2Q99743 AC010980.2-201ENST00000587099 1412 ntBASIC19.21■□□□□ 0.67
NPAS2Q99743 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS2Q99743 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPAS2Q99743 AC133041.1-202ENST00000642053 222 ntBASIC19.21■□□□□ 0.67
NPAS2Q99743 AC093503.3-201ENST00000624917 2352 ntBASIC19.21■□□□□ 0.67
NPAS2Q99743 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NPAS2Q99743 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS2Q99743 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS2Q99743 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS2Q99743 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAS2Q99743 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 Z82202.1-201ENST00000623446 1880 ntBASIC19.2■□□□□ 0.66
NPAS2Q99743 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPAS2Q99743 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NPAS2Q99743 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.2■□□□□ 0.66
NPAS2Q99743 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAS2Q99743 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.2■□□□□ 0.66
NPAS2Q99743 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.2■□□□□ 0.66
NPAS2Q99743 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.2■□□□□ 0.66
NPAS2Q99743 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NPAS2Q99743 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAS2Q99743 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS2Q99743 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS2Q99743 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAS2Q99743 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAS2Q99743 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
NPAS2Q99743 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS2Q99743 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NPAS2Q99743 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS2Q99743 ABHD17AP1-201ENST00000358206 933 ntBASIC19.19■□□□□ 0.66
NPAS2Q99743 BX276092.2-201ENST00000417668 665 ntBASIC19.19■□□□□ 0.66
NPAS2Q99743 MIR4758-201ENST00000577688 71 ntBASIC19.19■□□□□ 0.66
NPAS2Q99743 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS2Q99743 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS2Q99743 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NPAS2Q99743 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NPAS2Q99743 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NPAS2Q99743 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.18■□□□□ 0.66
NPAS2Q99743 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 CD99P1-205ENST00000527459 561 ntBASIC19.18■□□□□ 0.66
NPAS2Q99743 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS2Q99743 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NPAS2Q99743 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS2Q99743 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NPAS2Q99743 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms