Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 AL355472.2-201ENST00000422958 438 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 AC087623.3-201ENST00000607047 1098 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 AC011767.1-201ENST00000617410 1153 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 OR10C1-204ENST00000622521 1039 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 AC231657.2-201ENST00000624556 255 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.33■□□□□ 0.04
TRGV9Q99603 AC004408.2-201ENST00000623613 2777 ntBASIC15.33■□□□□ 0.04
TRGV9Q99603 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV9Q99603 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV9Q99603 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TRGV9Q99603 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRGV9Q99603 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV9Q99603 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV9Q99603 AC006015.1-201ENST00000429970 570 ntBASIC15.32■□□□□ 0.04
TRGV9Q99603 KRT18P5-201ENST00000436075 1291 ntBASIC15.32■□□□□ 0.04
TRGV9Q99603 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV9Q99603 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.32■□□□□ 0.04
TRGV9Q99603 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV9Q99603 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV9Q99603 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 AC010980.2-201ENST00000587099 1412 ntBASIC15.32■□□□□ 0.04
TRGV9Q99603 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRGV9Q99603 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRGV9Q99603 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV9Q99603 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRGV9Q99603 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV9Q99603 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRGV9Q99603 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.31■□□□□ 0.04
TRGV9Q99603 AC007322.1-201ENST00000426983 750 ntBASIC15.31■□□□□ 0.04
TRGV9Q99603 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV9Q99603 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRGV9Q99603 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV9Q99603 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms