Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 RARRES2P11-201ENST00000635158 484 ntBASIC16.52■□□□□ 0.24
CLCC1Q96S66 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.52■□□□□ 0.23
CLCC1Q96S66 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCC1Q96S66 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CLCC1Q96S66 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCC1Q96S66 AC092720.2-201ENST00000602388 1665 ntBASIC16.52■□□□□ 0.23
CLCC1Q96S66 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.52■□□□□ 0.23
CLCC1Q96S66 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCC1Q96S66 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.52■□□□□ 0.23
CLCC1Q96S66 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.52■□□□□ 0.23
CLCC1Q96S66 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.51■□□□□ 0.23
CLCC1Q96S66 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 MIR5787-201ENST00000611784 55 ntBASIC16.51■□□□□ 0.23
CLCC1Q96S66 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CLCC1Q96S66 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.51■□□□□ 0.23
CLCC1Q96S66 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 AL158211.5-201ENST00000623583 2518 ntBASIC16.51■□□□□ 0.23
CLCC1Q96S66 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCC1Q96S66 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCC1Q96S66 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCC1Q96S66 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 FZD10-202ENST00000539839 3282 ntBASIC16.49■□□□□ 0.23
CLCC1Q96S66 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 AC016769.1-201ENST00000409132 1010 ntBASIC16.49■□□□□ 0.23
CLCC1Q96S66 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms