Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COL21A1Q96P44 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
COL21A1Q96P44 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL21A1Q96P44 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.55■□□□□ 0.56
COL21A1Q96P44 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL21A1Q96P44 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL21A1Q96P44 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
COL21A1Q96P44 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.53■□□□□ 0.56
COL21A1Q96P44 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL21A1Q96P44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.52■□□□□ 0.56
COL21A1Q96P44 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 KRT8P17-201ENST00000453110 1448 ntBASIC18.52■□□□□ 0.56
COL21A1Q96P44 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL21A1Q96P44 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.52■□□□□ 0.56
COL21A1Q96P44 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms