Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS50Q96JG6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.19■□□□□ 0.66
VPS50Q96JG6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS50Q96JG6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS50Q96JG6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VPS50Q96JG6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS50Q96JG6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS50Q96JG6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 AC098818.2-201ENST00000564925 2320 ntBASIC19.18■□□□□ 0.66
VPS50Q96JG6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS50Q96JG6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VPS50Q96JG6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 UNC93B5-201ENST00000530315 699 ntBASIC19.17■□□□□ 0.66
VPS50Q96JG6 AC105020.6-201ENST00000621523 1217 ntBASIC19.17■□□□□ 0.66
VPS50Q96JG6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS50Q96JG6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS50Q96JG6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 AC026366.1-201ENST00000488803 879 ntBASIC19.16■□□□□ 0.66
VPS50Q96JG6 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS50Q96JG6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.16■□□□□ 0.66
VPS50Q96JG6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 AC092720.2-201ENST00000602388 1665 ntBASIC19.15■□□□□ 0.66
VPS50Q96JG6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS50Q96JG6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS50Q96JG6 AP003097.1-201ENST00000530657 1135 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms