Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 AL138966.2-201ENST00000621997 464 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 MYC-208ENST00000641036 567 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRNP40Q96DI7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 AL031133.1-201ENST00000406807 723 ntBASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 AC008040.2-201ENST00000461049 708 ntBASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRNP40Q96DI7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 LINC00565-201ENST00000562710 2331 ntBASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 AC004951.3-201ENST00000418645 1148 ntBASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 CCR12P-201ENST00000446203 998 ntBASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRNP40Q96DI7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 FP700111.2-201ENST00000619190 1892 ntBASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 TSPY5P-201ENST00000426936 936 ntBASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 YBX1P2-201ENST00000489612 999 ntBASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRNP40Q96DI7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNRNP40Q96DI7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 FAM207BP-201ENST00000447172 505 ntBASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRNP40Q96DI7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms