Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 UBE2SP1-201ENST00000450587 669 ntBASIC17.44■□□□□ 0.38
APH1AQ96BI3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AP006294.2-201ENST00000641667 209 ntBASIC17.43■□□□□ 0.38
APH1AQ96BI3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1AQ96BI3 TCF3P1-201ENST00000423021 1937 ntBASIC17.43■□□□□ 0.38
APH1AQ96BI3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 YBX1P10-201ENST00000444752 975 ntBASIC17.42■□□□□ 0.38
APH1AQ96BI3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
APH1AQ96BI3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APH1AQ96BI3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
APH1AQ96BI3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APH1AQ96BI3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms