Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF34Q969K3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF34Q969K3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF34Q969K3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNF34Q969K3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 HCG11-201ENST00000411553 5696 ntBASIC20.57■□□□□ 0.88
RNF34Q969K3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF34Q969K3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF34Q969K3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF34Q969K3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF34Q969K3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF34Q969K3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF34Q969K3 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
RNF34Q969K3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF34Q969K3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF34Q969K3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 AC116351.2-201ENST00000606540 1585 ntBASIC20.56■□□□□ 0.88
RNF34Q969K3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
RNF34Q969K3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF34Q969K3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF34Q969K3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF34Q969K3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF34Q969K3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 C1QBPP2-201ENST00000528754 825 ntBASIC20.56■□□□□ 0.88
RNF34Q969K3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF34Q969K3 MTDHP1-201ENST00000605323 784 ntBASIC20.56■□□□□ 0.88
RNF34Q969K3 AL023875.1-201ENST00000640777 796 ntBASIC20.56■□□□□ 0.88
RNF34Q969K3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF34Q969K3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF34Q969K3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF34Q969K3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF34Q969K3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RNF34Q969K3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF34Q969K3 RN7SL471P-201ENST00000580476 299 ntBASIC20.55■□□□□ 0.88
RNF34Q969K3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF34Q969K3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF34Q969K3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF34Q969K3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF34Q969K3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RNF34Q969K3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RNF34Q969K3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF34Q969K3 AP001271.2-201ENST00000624018 1556 ntBASIC20.55■□□□□ 0.88
RNF34Q969K3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RNF34Q969K3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
RNF34Q969K3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF34Q969K3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF34Q969K3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF34Q969K3 PRORSD1P-201ENST00000295112 541 ntBASIC20.54■□□□□ 0.88
RNF34Q969K3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF34Q969K3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF34Q969K3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF34Q969K3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF34Q969K3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF34Q969K3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF34Q969K3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
RNF34Q969K3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF34Q969K3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF34Q969K3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 AC239809.2-201ENST00000415381 517 ntBASIC20.53■□□□□ 0.88
RNF34Q969K3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RNF34Q969K3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF34Q969K3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF34Q969K3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.53■□□□□ 0.88
RNF34Q969K3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF34Q969K3 FAM197Y4-202ENST00000622692 608 ntBASIC20.53■□□□□ 0.88
RNF34Q969K3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms