Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DDX1Q92499 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 AC093484.2-201ENST00000580996 2166 ntBASIC20.97■□□□□ 0.95
DDX1Q92499 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX1Q92499 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX1Q92499 AC026366.1-201ENST00000488803 879 ntBASIC20.97■□□□□ 0.95
DDX1Q92499 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX1Q92499 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX1Q92499 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
DDX1Q92499 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 LINC01023-201ENST00000606054 436 ntBASIC20.97■□□□□ 0.95
DDX1Q92499 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DDX1Q92499 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DDX1Q92499 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DDX1Q92499 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX1Q92499 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX1Q92499 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX1Q92499 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DDX1Q92499 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX1Q92499 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DDX1Q92499 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.96■□□□□ 0.95
DDX1Q92499 MIR4497-201ENST00000583208 89 ntBASIC20.96■□□□□ 0.95
DDX1Q92499 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX1Q92499 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX1Q92499 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX1Q92499 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.95■□□□□ 0.95
DDX1Q92499 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DDX1Q92499 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DDX1Q92499 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
DDX1Q92499 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.95■□□□□ 0.94
DDX1Q92499 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DDX1Q92499 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX1Q92499 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.95■□□□□ 0.94
DDX1Q92499 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
DDX1Q92499 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
DDX1Q92499 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX1Q92499 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDX1Q92499 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.95■□□□□ 0.94
DDX1Q92499 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX1Q92499 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DDX1Q92499 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX1Q92499 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX1Q92499 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX1Q92499 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms