Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC44A1Q8WWI5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 AL138781.2-201ENST00000617896 1843 ntBASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC44A1Q8WWI5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 CYP2T1P-201ENST00000432607 1285 ntBASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 AC069236.1-201ENST00000604339 616 ntBASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC44A1Q8WWI5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SLC44A1Q8WWI5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 AL589743.5-201ENST00000616611 1050 ntBASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 AC011767.1-201ENST00000617410 1153 ntBASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms