Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 AC004264.1-201ENST00000608354 794 ntBASIC23.23■■□□□ 1.31
STAG1Q8WVM7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
STAG1Q8WVM7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
STAG1Q8WVM7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
STAG1Q8WVM7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
STAG1Q8WVM7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.2■■□□□ 1.3
STAG1Q8WVM7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
STAG1Q8WVM7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 TUBB8P6-201ENST00000436895 1288 ntBASIC23.18■■□□□ 1.3
STAG1Q8WVM7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
STAG1Q8WVM7 RARRES2P10-201ENST00000564312 460 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms