Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCD2Q8WV60 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCD2Q8WV60 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 AC005829.2-201ENST00000571422 1056 ntBASIC19.89■□□□□ 0.77
PTCD2Q8WV60 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCD2Q8WV60 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 GCSHP5-201ENST00000443090 522 ntBASIC19.88■□□□□ 0.77
PTCD2Q8WV60 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTCD2Q8WV60 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 AL390719.1-204ENST00000412397 1219 ntBASIC19.87■□□□□ 0.77
PTCD2Q8WV60 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCD2Q8WV60 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms