Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 KRT8P20-201ENST00000423953 1409 ntBASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 KRT18P68-201ENST00000392293 1000 ntBASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.46■□□□□ 0.87
CCHCR1Q8TD31 Z82202.1-201ENST00000623446 1880 ntBASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 HLA-L-209ENST00000420110 1011 ntBASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 AC104771.1-201ENST00000603335 964 ntBASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CCHCR1Q8TD31 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 LSM12P1-201ENST00000411836 588 ntBASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 BX276092.2-201ENST00000417668 665 ntBASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 AL355472.2-201ENST00000422958 438 ntBASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 AL589743.5-201ENST00000616611 1050 ntBASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 TNXA-203ENST00000507684 2038 ntBASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.44■□□□□ 0.86
CCHCR1Q8TD31 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 MIPEPP3-201ENST00000412105 444 ntBASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCHCR1Q8TD31 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCHCR1Q8TD31 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCHCR1Q8TD31 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCHCR1Q8TD31 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms