Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SMG8-203ENST00000578922 2178 ntBASIC15.35■□□□□ 0.05
LINC01006Q8NI28 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01006Q8NI28 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 BX664615.1-201ENST00000443558 458 ntBASIC15.34■□□□□ 0.05
LINC01006Q8NI28 AC008040.2-201ENST00000461049 708 ntBASIC15.34■□□□□ 0.05
LINC01006Q8NI28 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LINC01006Q8NI28 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01006Q8NI28 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.33■□□□□ 0.04
LINC01006Q8NI28 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 AK4P3-201ENST00000418260 669 ntBASIC15.33■□□□□ 0.04
LINC01006Q8NI28 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 MFAP1P1-201ENST00000442257 1255 ntBASIC15.33■□□□□ 0.04
LINC01006Q8NI28 FAM207BP-201ENST00000447172 505 ntBASIC15.33■□□□□ 0.04
LINC01006Q8NI28 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 PKD1P6-201ENST00000343738 4769 ntBASIC15.33■□□□□ 0.04
LINC01006Q8NI28 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC01006Q8NI28 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 TMEM179-206ENST00000616017 1645 ntBASIC15.32■□□□□ 0.04
LINC01006Q8NI28 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 HMGA1P5-201ENST00000412453 271 ntBASIC15.32■□□□□ 0.04
LINC01006Q8NI28 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 CCR12P-201ENST00000446203 998 ntBASIC15.32■□□□□ 0.04
LINC01006Q8NI28 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 AC116562.4-202ENST00000641738 218 ntBASIC15.32■□□□□ 0.04
LINC01006Q8NI28 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 AC096733.2-201ENST00000609937 1394 ntBASIC15.32■□□□□ 0.04
LINC01006Q8NI28 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC01006Q8NI28 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LINC01006Q8NI28 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms