Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 AC233702.5-201ENST00000584107 538 ntBASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDND2Q8NHS1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDND2Q8NHS1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 AC124283.5-201ENST00000624661 1809 ntBASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 AL121829.2-201ENST00000620908 328 ntBASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDND2Q8NHS1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 PLK5-205ENST00000642079 1969 ntBASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 AL135905.2-201ENST00000584934 1404 ntBASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDND2Q8NHS1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDND2Q8NHS1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms