Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 KRT17P3-201ENST00000420566 1262 ntBASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 AC026366.1-201ENST00000488803 879 ntBASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFBP1Q8NEF9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRFBP1Q8NEF9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
SRFBP1Q8NEF9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.77■□□□□ 0.59
SRFBP1Q8NEF9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.77■□□□□ 0.59
SRFBP1Q8NEF9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFBP1Q8NEF9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 CD99P1-205ENST00000527459 561 ntBASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 PRKY-204ENST00000533551 1019 ntBASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.75■□□□□ 0.59
SRFBP1Q8NEF9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC124283.5-201ENST00000624661 1809 ntBASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 AC008403.3-201ENST00000598924 454 ntBASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SRFBP1Q8NEF9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms