Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 MIR6084-201ENST00000622012 110 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM2Q8N967 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM2Q8N967 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM2Q8N967 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 AL390961.4-201ENST00000623958 2535 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM2Q8N967 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 AC007613.1-201ENST00000572811 2597 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM2Q8N967 PHGDH-210ENST00000641115 1638 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 AC120498.9-201ENST00000339021 3867 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM2Q8N967 AC141586.3-201ENST00000562166 1838 ntBASIC16.08■□□□□ 0.16
LRTM2Q8N967 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 AC027612.3-201ENST00000413684 1047 ntBASIC16.07■□□□□ 0.16
LRTM2Q8N967 AC096631.2-201ENST00000436136 790 ntBASIC16.07■□□□□ 0.16
LRTM2Q8N967 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM2Q8N967 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM2Q8N967 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM2Q8N967 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRTM2Q8N967 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AC093525.10-201ENST00000625130 1569 ntBASIC16.05■□□□□ 0.16
LRTM2Q8N967 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AL031432.3-201ENST00000607698 485 ntBASIC16.05■□□□□ 0.16
LRTM2Q8N967 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 AL031598.1-201ENST00000561511 1773 ntBASIC16.05■□□□□ 0.16
LRTM2Q8N967 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRTM2Q8N967 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.05■□□□□ 0.16
LRTM2Q8N967 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM2Q8N967 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRTM2Q8N967 AC090164.3-201ENST00000610780 2143 ntBASIC16.04■□□□□ 0.16
LRTM2Q8N967 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM2Q8N967 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.04■□□□□ 0.16
LRTM2Q8N967 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM2Q8N967 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.04■□□□□ 0.16
LRTM2Q8N967 LINC02228-203ENST00000641970 1355 ntBASIC16.04■□□□□ 0.16
LRTM2Q8N967 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms