Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC33Q8N5R6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 RPS2P55-201ENST00000397318 883 ntBASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 KRASP1-201ENST00000407852 552 ntBASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TSPY7P-201ENST00000431358 1114 ntBASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 AC107956.1-201ENST00000494359 873 ntBASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC33Q8N5R6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 BX119927.1-201ENST00000636596 1552 ntBASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC33Q8N5R6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 AC211429.1-201ENST00000415277 523 ntBASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 AC012618.2-201ENST00000428058 849 ntBASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 AC233702.5-201ENST00000584107 538 ntBASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC33Q8N5R6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 AC007952.6-201ENST00000573168 2673 ntBASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 AC003957.1-201ENST00000625108 2673 ntBASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 AC133681.1-201ENST00000465482 601 ntBASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC33Q8N5R6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms