Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC006557.6-201ENST00000623071 864 ntBASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC9CQ8N5M4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 AC018553.1-201ENST00000616682 1458 ntBASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 HLA-L-209ENST00000420110 1011 ntBASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
TTC9CQ8N5M4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 ID1-201ENST00000376105 1233 ntBASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC9CQ8N5M4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 AL355802.2-201ENST00000402069 882 ntBASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
TTC9CQ8N5M4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 TFP1-202ENST00000475455 1573 ntBASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 TREX1-205ENST00000625293 1783 ntBASIC15.52■□□□□ 0.07
TTC9CQ8N5M4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TTC9CQ8N5M4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC9CQ8N5M4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TTC9CQ8N5M4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC9CQ8N5M4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TTC9CQ8N5M4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms