Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE9Q8IYJ1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE9Q8IYJ1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE9Q8IYJ1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 HLA-B-256ENST00000639848 1089 ntBASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 AC018553.1-201ENST00000616682 1458 ntBASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CPNE9Q8IYJ1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 AC124283.5-201ENST00000624661 1809 ntBASIC19.44■□□□□ 0.7
CPNE9Q8IYJ1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 PNMA6B-201ENST00000538162 1200 ntBASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 AC060766.5-201ENST00000590539 871 ntBASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE9Q8IYJ1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 AC116351.2-201ENST00000606540 1585 ntBASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE9Q8IYJ1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE9Q8IYJ1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
CPNE9Q8IYJ1 AC116562.4-201ENST00000641316 2276 ntBASIC19.41■□□□□ 0.7
CPNE9Q8IYJ1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms