Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM42Q8IWZ5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRIM42Q8IWZ5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM42Q8IWZ5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM42Q8IWZ5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM42Q8IWZ5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 AC020763.4-201ENST00000623414 4170 ntBASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM42Q8IWZ5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM42Q8IWZ5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 BCL2-203ENST00000589955 5011 ntBASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 AL162430.1-201ENST00000480705 870 ntBASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM42Q8IWZ5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM42Q8IWZ5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms