Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC60Q8IWA6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 KRT16P1-201ENST00000399124 1418 ntBASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 REXO1L10P-201ENST00000615707 1290 ntBASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 REXO1L12P-201ENST00000622156 912 ntBASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC60Q8IWA6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC60Q8IWA6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC60Q8IWA6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 AL445675.2-201ENST00000620291 557 ntBASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCDC60Q8IWA6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC60Q8IWA6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 AC211429.1-201ENST00000415277 523 ntBASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC60Q8IWA6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms