Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.71■□□□□ 0.91
CCDC149Q6ZUS6 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.7■□□□□ 0.91
CCDC149Q6ZUS6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 B3GAT3P1-201ENST00000471720 806 ntBASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 AP005242.2-201ENST00000580065 1175 ntBASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 LINC00565-201ENST00000562710 2331 ntBASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC149Q6ZUS6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 MESTP1-201ENST00000404287 994 ntBASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 AC004980.1-204ENST00000429707 299 ntBASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 EGLN1P1-201ENST00000531623 762 ntBASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 WWOX-216ENST00000569818 525 ntBASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC149Q6ZUS6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 AC006011.2-201ENST00000621313 1158 ntBASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC149Q6ZUS6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC149Q6ZUS6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 TSPY14P-201ENST00000303979 915 ntBASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 AC011506.1-201ENST00000474329 610 ntBASIC20.66■□□□□ 0.9
CCDC149Q6ZUS6 AC128688.1-201ENST00000487626 519 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms