Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KCNIP4Q6PIL6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 AC241377.3-202ENST00000626088 1088 ntBASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 AC241585.3-202ENST00000628937 1088 ntBASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 AC245100.8-202ENST00000629247 1058 ntBASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 AL133373.2-201ENST00000623187 2828 ntBASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.24■□□□□ 0.03
KCNIP4Q6PIL6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 AC133637.1-201ENST00000624115 1537 ntBASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 AL691432.2-201ENST00000607222 2038 ntBASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 UNC93B8-201ENST00000511903 705 ntBASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 AC104581.1-202ENST00000635932 2618 ntBASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 AC009113.1-201ENST00000570267 2443 ntBASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP4Q6PIL6 BX005040.4-201ENST00000637145 1518 ntBASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 CROCCP3-202ENST00000420820 1947 ntBASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 AC092171.4-201ENST00000609130 632 ntBASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 OR6D1P-203ENST00000641209 4860 ntBASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP4Q6PIL6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP4Q6PIL6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP4Q6PIL6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms