Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 LINC01023-201ENST00000606054 436 ntBASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AC026471.5-201ENST00000615068 467 ntBASIC17.77■□□□□ 0.44
RTL6Q6ICC9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.77■□□□□ 0.44
RTL6Q6ICC9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 FP700111.2-201ENST00000619190 1892 ntBASIC17.77■□□□□ 0.43
RTL6Q6ICC9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTL6Q6ICC9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.76■□□□□ 0.43
RTL6Q6ICC9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 KRT8P17-201ENST00000453110 1448 ntBASIC17.75■□□□□ 0.43
RTL6Q6ICC9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 AC087499.1-201ENST00000418141 1075 ntBASIC17.75■□□□□ 0.43
RTL6Q6ICC9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 CD177P1-201ENST00000606252 935 ntBASIC17.75■□□□□ 0.43
RTL6Q6ICC9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.75■□□□□ 0.43
RTL6Q6ICC9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 FAM197Y1-201ENST00000421178 764 ntBASIC17.74■□□□□ 0.43
RTL6Q6ICC9 AL353807.1-201ENST00000427475 662 ntBASIC17.74■□□□□ 0.43
RTL6Q6ICC9 AP003071.4-201ENST00000562276 1284 ntBASIC17.74■□□□□ 0.43
RTL6Q6ICC9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RTL6Q6ICC9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 AP005212.1-201ENST00000581547 1997 ntBASIC17.73■□□□□ 0.43
RTL6Q6ICC9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RTL6Q6ICC9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms