Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC011298.3-201ENST00000615796 283 ntBASIC18.54■□□□□ 0.56
LPCAT4Q643R3 AC106820.2-201ENST00000563775 3264 ntBASIC18.54■□□□□ 0.56
LPCAT4Q643R3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LPCAT4Q643R3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.53■□□□□ 0.56
LPCAT4Q643R3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LPCAT4Q643R3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.52■□□□□ 0.56
LPCAT4Q643R3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LPCAT4Q643R3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LPCAT4Q643R3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LPCAT4Q643R3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LPCAT4Q643R3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LPCAT4Q643R3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 AC067852.2-201ENST00000590513 2313 ntBASIC18.51■□□□□ 0.55
LPCAT4Q643R3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LPCAT4Q643R3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LPCAT4Q643R3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.49■□□□□ 0.55
LPCAT4Q643R3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms