Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LINC01568-207ENST00000641790 1380 ntBASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNFT1Q5M7Z0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 TMPOP1-202ENST00000424642 1267 ntBASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 B3GAT3P1-201ENST00000471720 806 ntBASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 AC026271.3-201ENST00000571884 352 ntBASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.74■□□□□ 0.43
RNFT1Q5M7Z0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 NAPSB-206ENST00000562112 1266 ntBASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 HLA-A-209ENST00000638375 975 ntBASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 FSCN1P1-201ENST00000568912 1481 ntBASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNFT1Q5M7Z0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 TMEM179-206ENST00000616017 1645 ntBASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNFT1Q5M7Z0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 AC005521.1-201ENST00000393351 872 ntBASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 AC005363.2-201ENST00000618631 242 ntBASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 AC131212.4-201ENST00000623606 975 ntBASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNFT1Q5M7Z0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNFT1Q5M7Z0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RNFT1Q5M7Z0 AL512408.1-201ENST00000569378 2000 ntBASIC17.71■□□□□ 0.42
RNFT1Q5M7Z0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNFT1Q5M7Z0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms