Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CDH17Q12864 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH17Q12864 TFP1-202ENST00000475455 1573 ntBASIC19.88■□□□□ 0.77
CDH17Q12864 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH17Q12864 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDH17Q12864 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH17Q12864 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH17Q12864 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH17Q12864 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH17Q12864 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH17Q12864 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH17Q12864 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH17Q12864 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
CDH17Q12864 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 AC090192.1-201ENST00000517740 490 ntBASIC19.87■□□□□ 0.77
CDH17Q12864 AC098934.4-201ENST00000564127 592 ntBASIC19.87■□□□□ 0.77
CDH17Q12864 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH17Q12864 AC060766.5-201ENST00000590539 871 ntBASIC19.87■□□□□ 0.77
CDH17Q12864 AC104771.1-201ENST00000603335 964 ntBASIC19.87■□□□□ 0.77
CDH17Q12864 AC133041.1-202ENST00000642053 222 ntBASIC19.87■□□□□ 0.77
CDH17Q12864 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDH17Q12864 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH17Q12864 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH17Q12864 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH17Q12864 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH17Q12864 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH17Q12864 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH17Q12864 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH17Q12864 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH17Q12864 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH17Q12864 AC083880.1-201ENST00000608266 535 ntBASIC19.86■□□□□ 0.77
CDH17Q12864 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CDH17Q12864 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH17Q12864 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH17Q12864 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDH17Q12864 AC005332.7-201ENST00000614046 2005 ntBASIC19.85■□□□□ 0.77
CDH17Q12864 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH17Q12864 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 AC069152.1-201ENST00000438030 544 ntBASIC19.85■□□□□ 0.77
CDH17Q12864 PNMA6B-201ENST00000538162 1200 ntBASIC19.85■□□□□ 0.77
CDH17Q12864 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.85■□□□□ 0.77
CDH17Q12864 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH17Q12864 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH17Q12864 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDH17Q12864 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH17Q12864 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH17Q12864 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH17Q12864 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH17Q12864 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH17Q12864 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH17Q12864 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH17Q12864 RPS2P52-201ENST00000469610 820 ntBASIC19.84■□□□□ 0.77
CDH17Q12864 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH17Q12864 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH17Q12864 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.84■□□□□ 0.77
CDH17Q12864 AC142086.2-201ENST00000569753 217 ntBASIC19.84■□□□□ 0.77
CDH17Q12864 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH17Q12864 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms