Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.97■□□□□ 0.95
CDR2Q01850 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDR2Q01850 AC142086.2-201ENST00000569753 217 ntBASIC20.97■□□□□ 0.95
CDR2Q01850 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.97■□□□□ 0.95
CDR2Q01850 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.97■□□□□ 0.95
CDR2Q01850 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDR2Q01850 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDR2Q01850 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDR2Q01850 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 AC069152.1-201ENST00000438030 544 ntBASIC20.96■□□□□ 0.95
CDR2Q01850 AC060766.5-201ENST00000590539 871 ntBASIC20.96■□□□□ 0.95
CDR2Q01850 AC133041.1-202ENST00000642053 222 ntBASIC20.96■□□□□ 0.95
CDR2Q01850 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDR2Q01850 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDR2Q01850 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.96■□□□□ 0.95
CDR2Q01850 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDR2Q01850 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
CDR2Q01850 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CDR2Q01850 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.95
CDR2Q01850 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDR2Q01850 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDR2Q01850 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.95■□□□□ 0.94
CDR2Q01850 AC124283.5-201ENST00000624661 1809 ntBASIC20.95■□□□□ 0.94
CDR2Q01850 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDR2Q01850 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.95■□□□□ 0.94
CDR2Q01850 PNMA6B-201ENST00000538162 1200 ntBASIC20.95■□□□□ 0.94
CDR2Q01850 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.95■□□□□ 0.94
CDR2Q01850 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDR2Q01850 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDR2Q01850 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.95■□□□□ 0.94
CDR2Q01850 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 AC005332.7-201ENST00000614046 2005 ntBASIC20.94■□□□□ 0.94
CDR2Q01850 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR2Q01850 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDR2Q01850 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR2Q01850 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR2Q01850 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR2Q01850 RPS2P52-201ENST00000469610 820 ntBASIC20.94■□□□□ 0.94
CDR2Q01850 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR2Q01850 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.94■□□□□ 0.94
CDR2Q01850 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.94■□□□□ 0.94
CDR2Q01850 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.94■□□□□ 0.94
CDR2Q01850 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR2Q01850 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDR2Q01850 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDR2Q01850 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR2Q01850 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR2Q01850 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDR2Q01850 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.94■□□□□ 0.94
CDR2Q01850 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDR2Q01850 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDR2Q01850 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CDR2Q01850 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.93■□□□□ 0.94
CDR2Q01850 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.93■□□□□ 0.94
CDR2Q01850 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.93■□□□□ 0.94
CDR2Q01850 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CDR2Q01850 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDR2Q01850 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CDR2Q01850 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.93■□□□□ 0.94
CDR2Q01850 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDR2Q01850 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms