Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.21■□□□□ 0.19
SRPXP78539 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.21■□□□□ 0.19
SRPXP78539 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.21■□□□□ 0.19
SRPXP78539 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.21■□□□□ 0.19
SRPXP78539 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRPXP78539 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SRPXP78539 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.21■□□□□ 0.18
SRPXP78539 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRPXP78539 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRPXP78539 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.2■□□□□ 0.18
SRPXP78539 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.2■□□□□ 0.18
SRPXP78539 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.2■□□□□ 0.18
SRPXP78539 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.2■□□□□ 0.18
SRPXP78539 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.2■□□□□ 0.18
SRPXP78539 AL031963.3-201ENST00000606441 850 ntBASIC16.2■□□□□ 0.18
SRPXP78539 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRPXP78539 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.2■□□□□ 0.18
SRPXP78539 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRPXP78539 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.19■□□□□ 0.18
SRPXP78539 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.19■□□□□ 0.18
SRPXP78539 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SRPXP78539 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRPXP78539 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRPXP78539 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.19■□□□□ 0.18
SRPXP78539 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRPXP78539 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.19■□□□□ 0.18
SRPXP78539 OR6D1P-202ENST00000641007 5290 ntBASIC16.19■□□□□ 0.18
SRPXP78539 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRPXP78539 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRPXP78539 KRT8P20-201ENST00000423953 1409 ntBASIC16.19■□□□□ 0.18
SRPXP78539 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.18■□□□□ 0.18
SRPXP78539 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 AC096631.2-201ENST00000436136 790 ntBASIC16.18■□□□□ 0.18
SRPXP78539 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.18■□□□□ 0.18
SRPXP78539 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SRPXP78539 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.18■□□□□ 0.18
SRPXP78539 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRPXP78539 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
SRPXP78539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms