Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
IRX4P78413 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.39■□□□□ 0.85
IRX4P78413 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IRX4P78413 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
IRX4P78413 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX4P78413 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IRX4P78413 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IRX4P78413 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.38■□□□□ 0.85
IRX4P78413 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.38■□□□□ 0.85
IRX4P78413 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
IRX4P78413 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.38■□□□□ 0.85
IRX4P78413 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.38■□□□□ 0.85
IRX4P78413 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IRX4P78413 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.38■□□□□ 0.85
IRX4P78413 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IRX4P78413 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.38■□□□□ 0.85
IRX4P78413 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
IRX4P78413 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IRX4P78413 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
IRX4P78413 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IRX4P78413 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IRX4P78413 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
IRX4P78413 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.37■□□□□ 0.85
IRX4P78413 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 AC007322.3-201ENST00000426526 701 ntBASIC20.37■□□□□ 0.85
IRX4P78413 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.37■□□□□ 0.85
IRX4P78413 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 AC133561.5-201ENST00000635547 218 ntBASIC20.37■□□□□ 0.85
IRX4P78413 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
IRX4P78413 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.37■□□□□ 0.85
IRX4P78413 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IRX4P78413 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IRX4P78413 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
IRX4P78413 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
IRX4P78413 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.36■□□□□ 0.85
IRX4P78413 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.36■□□□□ 0.85
IRX4P78413 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
IRX4P78413 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 MTDHP1-201ENST00000605323 784 ntBASIC20.36■□□□□ 0.85
IRX4P78413 AL049637.2-201ENST00000641778 930 ntBASIC20.36■□□□□ 0.85
IRX4P78413 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
IRX4P78413 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
IRX4P78413 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.36■□□□□ 0.85
IRX4P78413 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
IRX4P78413 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IRX4P78413 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms