Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HIST1H3AP68431 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HIST1H3AP68431 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HIST1H3AP68431 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIST1H3AP68431 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIST1H3AP68431 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIST1H3AP68431 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HIST1H3AP68431 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HIST1H3AP68431 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
HIST1H3AP68431 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 AC120498.8-201ENST00000614275 531 ntBASIC17.19■□□□□ 0.34
HIST1H3AP68431 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HIST1H3AP68431 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.19■□□□□ 0.34
HIST1H3AP68431 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 HLA-L-209ENST00000420110 1011 ntBASIC17.18■□□□□ 0.34
HIST1H3AP68431 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.18■□□□□ 0.34
HIST1H3AP68431 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.18■□□□□ 0.34
HIST1H3AP68431 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 AC124283.5-201ENST00000624661 1809 ntBASIC17.18■□□□□ 0.34
HIST1H3AP68431 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 AC116562.4-201ENST00000641316 2276 ntBASIC17.18■□□□□ 0.34
HIST1H3AP68431 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H3AP68431 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HIST1H3AP68431 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H3AP68431 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H3AP68431 AC093484.2-201ENST00000580996 2166 ntBASIC17.16■□□□□ 0.34
HIST1H3AP68431 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms