Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.84■□□□□ 0.77
AP1S1P61966 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.84■□□□□ 0.77
AP1S1P61966 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP1S1P61966 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP1S1P61966 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.83■□□□□ 0.77
AP1S1P61966 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP1S1P61966 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.83■□□□□ 0.77
AP1S1P61966 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.83■□□□□ 0.77
AP1S1P61966 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP1S1P61966 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.83■□□□□ 0.77
AP1S1P61966 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.83■□□□□ 0.77
AP1S1P61966 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.83■□□□□ 0.77
AP1S1P61966 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S1P61966 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
AP1S1P61966 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S1P61966 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S1P61966 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.83■□□□□ 0.76
AP1S1P61966 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP1S1P61966 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.83■□□□□ 0.76
AP1S1P61966 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AP1S1P61966 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AP1S1P61966 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.82■□□□□ 0.76
AP1S1P61966 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.82■□□□□ 0.76
AP1S1P61966 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 TUBB8P6-201ENST00000436895 1288 ntBASIC19.82■□□□□ 0.76
AP1S1P61966 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.82■□□□□ 0.76
AP1S1P61966 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.82■□□□□ 0.76
AP1S1P61966 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AP1S1P61966 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP1S1P61966 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
AP1S1P61966 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
AP1S1P61966 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.81■□□□□ 0.76
AP1S1P61966 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.81■□□□□ 0.76
AP1S1P61966 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.81■□□□□ 0.76
AP1S1P61966 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.81■□□□□ 0.76
AP1S1P61966 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
AP1S1P61966 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
AP1S1P61966 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
AP1S1P61966 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP1S1P61966 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
AP1S1P61966 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
AP1S1P61966 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP1S1P61966 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.8■□□□□ 0.76
AP1S1P61966 RARRES2P10-201ENST00000564312 460 ntBASIC19.8■□□□□ 0.76
AP1S1P61966 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.8■□□□□ 0.76
AP1S1P61966 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP1S1P61966 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
AP1S1P61966 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.8■□□□□ 0.76
AP1S1P61966 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP1S1P61966 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP1S1P61966 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms