Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.16■□□□□ 0.34
SEC61A1P61619 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SEC61A1P61619 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 AC007322.3-201ENST00000426526 701 ntBASIC17.16■□□□□ 0.34
SEC61A1P61619 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 CD99P1-205ENST00000527459 561 ntBASIC17.16■□□□□ 0.34
SEC61A1P61619 KRT18P6-201ENST00000555540 1265 ntBASIC17.16■□□□□ 0.34
SEC61A1P61619 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SEC61A1P61619 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.16■□□□□ 0.34
SEC61A1P61619 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SEC61A1P61619 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SEC61A1P61619 TCF3P1-201ENST00000423021 1937 ntBASIC17.15■□□□□ 0.34
SEC61A1P61619 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.15■□□□□ 0.34
SEC61A1P61619 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SEC61A1P61619 AL158211.5-201ENST00000623583 2518 ntBASIC17.15■□□□□ 0.34
SEC61A1P61619 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SEC61A1P61619 AC073210.2-201ENST00000430369 194 ntBASIC17.15■□□□□ 0.34
SEC61A1P61619 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.15■□□□□ 0.34
SEC61A1P61619 AC092118.2-201ENST00000613495 667 ntBASIC17.15■□□□□ 0.34
SEC61A1P61619 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SEC61A1P61619 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.15■□□□□ 0.34
SEC61A1P61619 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61A1P61619 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SEC61A1P61619 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SEC61A1P61619 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SEC61A1P61619 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.14■□□□□ 0.33
SEC61A1P61619 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SEC61A1P61619 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.14■□□□□ 0.33
SEC61A1P61619 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.14■□□□□ 0.33
SEC61A1P61619 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 KRT17P1-201ENST00000399211 1546 ntBASIC17.14■□□□□ 0.33
SEC61A1P61619 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.14■□□□□ 0.33
SEC61A1P61619 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SEC61A1P61619 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SEC61A1P61619 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SEC61A1P61619 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.13■□□□□ 0.33
SEC61A1P61619 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SEC61A1P61619 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
SEC61A1P61619 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.13■□□□□ 0.33
SEC61A1P61619 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SEC61A1P61619 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.13■□□□□ 0.33
SEC61A1P61619 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.13■□□□□ 0.33
SEC61A1P61619 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SEC61A1P61619 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms