Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.21■■□□□ 1.63
KCNQ4P56696 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.21■■□□□ 1.63
KCNQ4P56696 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.21■■□□□ 1.63
KCNQ4P56696 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.21■■□□□ 1.63
KCNQ4P56696 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KCNQ4P56696 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.2■■□□□ 1.63
KCNQ4P56696 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.2■■□□□ 1.62
KCNQ4P56696 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.2■■□□□ 1.62
KCNQ4P56696 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 PRSS44-201ENST00000515154 1146 ntBASIC25.2■■□□□ 1.62
KCNQ4P56696 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC25.2■■□□□ 1.62
KCNQ4P56696 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KCNQ4P56696 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
KCNQ4P56696 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
KCNQ4P56696 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNQ4P56696 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KCNQ4P56696 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC25.19■■□□□ 1.62
KCNQ4P56696 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KCNQ4P56696 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
KCNQ4P56696 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNQ4P56696 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KCNQ4P56696 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.18■■□□□ 1.62
KCNQ4P56696 FP700111.2-201ENST00000619190 1892 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 AC246785.2-201ENST00000432512 513 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
KCNQ4P56696 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.18■■□□□ 1.62
KCNQ4P56696 HOMER2P1-201ENST00000455653 964 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 Z85996.1-201ENST00000494644 937 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC25.18■■□□□ 1.62
KCNQ4P56696 AC140113.3-201ENST00000605663 199 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 AC069148.1-201ENST00000608741 768 ntBASIC25.18■■□□□ 1.62
KCNQ4P56696 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
KCNQ4P56696 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
KCNQ4P56696 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.18■■□□□ 1.62
KCNQ4P56696 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KCNQ4P56696 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
KCNQ4P56696 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNQ4P56696 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNQ4P56696 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.17■■□□□ 1.62
KCNQ4P56696 TSPY21P-201ENST00000433481 731 ntBASIC25.17■■□□□ 1.62
KCNQ4P56696 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC25.17■■□□□ 1.62
KCNQ4P56696 TSPY23P-201ENST00000440136 739 ntBASIC25.17■■□□□ 1.62
KCNQ4P56696 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.17■■□□□ 1.62
KCNQ4P56696 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNQ4P56696 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
KCNQ4P56696 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
KCNQ4P56696 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNQ4P56696 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KCNQ4P56696 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.16■■□□□ 1.62
KCNQ4P56696 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.16■■□□□ 1.62
KCNQ4P56696 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC25.16■■□□□ 1.62
KCNQ4P56696 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
KCNQ4P56696 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.16■■□□□ 1.62
KCNQ4P56696 AL353719.1-201ENST00000566847 864 ntBASIC25.16■■□□□ 1.62
KCNQ4P56696 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.16■■□□□ 1.62
KCNQ4P56696 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
KCNQ4P56696 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KCNQ4P56696 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
KCNQ4P56696 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.15■■□□□ 1.62
KCNQ4P56696 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
KCNQ4P56696 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
KCNQ4P56696 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 VENTXP5-201ENST00000523979 775 ntBASIC25.15■■□□□ 1.62
KCNQ4P56696 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.15■■□□□ 1.62
KCNQ4P56696 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.15■■□□□ 1.62
KCNQ4P56696 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.15■■□□□ 1.62
KCNQ4P56696 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.15■■□□□ 1.62
KCNQ4P56696 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.15■■□□□ 1.62
KCNQ4P56696 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
KCNQ4P56696 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
KCNQ4P56696 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms