Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.17■□□□□ 0.5
PER3P56645 AC005829.2-201ENST00000571422 1056 ntBASIC18.17■□□□□ 0.5
PER3P56645 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.17■□□□□ 0.5
PER3P56645 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.17■□□□□ 0.5
PER3P56645 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.17■□□□□ 0.5
PER3P56645 AC012306.2-201ENST00000609350 630 ntBASIC18.17■□□□□ 0.5
PER3P56645 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
PER3P56645 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PER3P56645 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PER3P56645 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 Z98882.1-201ENST00000622160 2253 ntBASIC18.16■□□□□ 0.5
PER3P56645 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PER3P56645 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.16■□□□□ 0.5
PER3P56645 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.16■□□□□ 0.5
PER3P56645 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 ARMC10P1-201ENST00000313754 855 ntBASIC18.16■□□□□ 0.5
PER3P56645 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PER3P56645 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.16■□□□□ 0.5
PER3P56645 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.16■□□□□ 0.5
PER3P56645 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.16■□□□□ 0.5
PER3P56645 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.16■□□□□ 0.5
PER3P56645 AL445228.2-201ENST00000605589 952 ntBASIC18.16■□□□□ 0.5
PER3P56645 AL590326.2-201ENST00000625139 305 ntBASIC18.16■□□□□ 0.5
PER3P56645 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.16■□□□□ 0.5
PER3P56645 FEM1AP4-201ENST00000443167 1987 ntBASIC18.16■□□□□ 0.5
PER3P56645 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PER3P56645 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PER3P56645 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PER3P56645 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.15■□□□□ 0.5
PER3P56645 FEM1AP1-201ENST00000431297 1995 ntBASIC18.15■□□□□ 0.5
PER3P56645 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
PER3P56645 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.15■□□□□ 0.5
PER3P56645 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 AL355355.2-201ENST00000442321 338 ntBASIC18.15■□□□□ 0.5
PER3P56645 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.15■□□□□ 0.5
PER3P56645 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.15■□□□□ 0.5
PER3P56645 AL356652.1-201ENST00000615962 565 ntBASIC18.15■□□□□ 0.5
PER3P56645 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PER3P56645 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PER3P56645 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.15■□□□□ 0.5
PER3P56645 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PER3P56645 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.14■□□□□ 0.5
PER3P56645 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PER3P56645 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.14■□□□□ 0.49
PER3P56645 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.14■□□□□ 0.49
PER3P56645 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 AC026471.5-201ENST00000615068 467 ntBASIC18.14■□□□□ 0.49
PER3P56645 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PER3P56645 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.14■□□□□ 0.49
PER3P56645 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.14■□□□□ 0.49
PER3P56645 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PER3P56645 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PER3P56645 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.14■□□□□ 0.49
PER3P56645 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PER3P56645 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PER3P56645 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
PER3P56645 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms