Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH12P55289 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 KRT18P68-201ENST00000392293 1000 ntBASIC18.3■□□□□ 0.52
CDH12P55289 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH12P55289 AC007322.1-201ENST00000426983 750 ntBASIC18.3■□□□□ 0.52
CDH12P55289 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH12P55289 AC069236.1-201ENST00000604339 616 ntBASIC18.3■□□□□ 0.52
CDH12P55289 AC231657.2-201ENST00000624556 255 ntBASIC18.3■□□□□ 0.52
CDH12P55289 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH12P55289 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH12P55289 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 KRT8P17-201ENST00000453110 1448 ntBASIC18.3■□□□□ 0.52
CDH12P55289 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH12P55289 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH12P55289 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH12P55289 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 AC020763.4-201ENST00000623414 4170 ntBASIC18.29■□□□□ 0.52
CDH12P55289 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 AC022517.1-201ENST00000592429 346 ntBASIC18.29■□□□□ 0.52
CDH12P55289 AC105020.6-201ENST00000621523 1217 ntBASIC18.29■□□□□ 0.52
CDH12P55289 AC008694.1-202ENST00000636953 945 ntBASIC18.29■□□□□ 0.52
CDH12P55289 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CDH12P55289 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH12P55289 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH12P55289 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH12P55289 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDH12P55289 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.28■□□□□ 0.52
CDH12P55289 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH12P55289 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CDH12P55289 KRT16P6-202ENST00000425692 1426 ntBASIC18.28■□□□□ 0.52
CDH12P55289 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH12P55289 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH12P55289 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH12P55289 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH12P55289 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 AL032819.2-201ENST00000624543 2162 ntBASIC18.27■□□□□ 0.52
CDH12P55289 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 AL355472.2-201ENST00000422958 438 ntBASIC18.27■□□□□ 0.52
CDH12P55289 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH12P55289 CYP2T3P-201ENST00000601990 817 ntBASIC18.27■□□□□ 0.52
CDH12P55289 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH12P55289 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH12P55289 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH12P55289 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH12P55289 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CDH12P55289 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms