Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EPHA4P54764 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
EPHA4P54764 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHA4P54764 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHA4P54764 MMP23A-201ENST00000234610 1017 ntBASIC18.96■□□□□ 0.63
EPHA4P54764 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EPHA4P54764 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 RBM17P1-201ENST00000453646 1190 ntBASIC18.96■□□□□ 0.63
EPHA4P54764 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHA4P54764 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EPHA4P54764 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHA4P54764 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
EPHA4P54764 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA4P54764 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA4P54764 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA4P54764 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA4P54764 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EPHA4P54764 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.95■□□□□ 0.62
EPHA4P54764 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHA4P54764 AC133561.5-201ENST00000635547 218 ntBASIC18.95■□□□□ 0.62
EPHA4P54764 AC097493.4-201ENST00000641197 219 ntBASIC18.95■□□□□ 0.62
EPHA4P54764 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EPHA4P54764 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.95■□□□□ 0.62
EPHA4P54764 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
EPHA4P54764 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA4P54764 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA4P54764 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
EPHA4P54764 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA4P54764 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA4P54764 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA4P54764 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHA4P54764 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA4P54764 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.94■□□□□ 0.62
EPHA4P54764 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHA4P54764 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.94■□□□□ 0.62
EPHA4P54764 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA4P54764 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA4P54764 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 FSCN1P1-201ENST00000568912 1481 ntBASIC18.93■□□□□ 0.62
EPHA4P54764 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHA4P54764 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHA4P54764 AC012306.2-201ENST00000609350 630 ntBASIC18.93■□□□□ 0.62
EPHA4P54764 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHA4P54764 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA4P54764 TMEM179-206ENST00000616017 1645 ntBASIC18.92■□□□□ 0.62
EPHA4P54764 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA4P54764 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA4P54764 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms