Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PMS1P54277 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PMS1P54277 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.65■■□□□ 1.06
PMS1P54277 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 SLC29A4P1-201ENST00000398760 971 ntBASIC21.65■■□□□ 1.06
PMS1P54277 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.65■■□□□ 1.06
PMS1P54277 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.65■■□□□ 1.06
PMS1P54277 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.65■■□□□ 1.06
PMS1P54277 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.65■■□□□ 1.06
PMS1P54277 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.65■■□□□ 1.06
PMS1P54277 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.65■■□□□ 1.06
PMS1P54277 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PMS1P54277 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.65■■□□□ 1.06
PMS1P54277 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.65■■□□□ 1.06
PMS1P54277 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PMS1P54277 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PMS1P54277 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PMS1P54277 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PMS1P54277 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PMS1P54277 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS1P54277 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.64■■□□□ 1.05
PMS1P54277 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.64■■□□□ 1.05
PMS1P54277 AC083880.1-201ENST00000608266 535 ntBASIC21.64■■□□□ 1.05
PMS1P54277 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.64■■□□□ 1.05
PMS1P54277 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PMS1P54277 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS1P54277 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS1P54277 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS1P54277 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.64■■□□□ 1.05
PMS1P54277 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PMS1P54277 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.63■■□□□ 1.05
PMS1P54277 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.63■■□□□ 1.05
PMS1P54277 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
PMS1P54277 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.63■■□□□ 1.05
PMS1P54277 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PMS1P54277 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.62■■□□□ 1.05
PMS1P54277 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.62■■□□□ 1.05
PMS1P54277 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PMS1P54277 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.62■■□□□ 1.05
PMS1P54277 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.62■■□□□ 1.05
PMS1P54277 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PMS1P54277 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms