Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATN1P54259 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.74■■□□□ 1.07
ATN1P54259 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATN1P54259 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATN1P54259 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 Z98882.1-201ENST00000622160 2253 ntBASIC21.73■■□□□ 1.07
ATN1P54259 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
ATN1P54259 AC244015.2-201ENST00000616358 1861 ntBASIC21.73■■□□□ 1.07
ATN1P54259 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 AL024507.2-201ENST00000606070 2574 ntBASIC21.73■■□□□ 1.07
ATN1P54259 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ATN1P54259 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.73■■□□□ 1.07
ATN1P54259 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ATN1P54259 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.73■■□□□ 1.07
ATN1P54259 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.73■■□□□ 1.07
ATN1P54259 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.73■■□□□ 1.07
ATN1P54259 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
ATN1P54259 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATN1P54259 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.73■■□□□ 1.07
ATN1P54259 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.73■■□□□ 1.07
ATN1P54259 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
ATN1P54259 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.72■■□□□ 1.07
ATN1P54259 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.72■■□□□ 1.07
ATN1P54259 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 KRT18P38-201ENST00000449496 1282 ntBASIC21.72■■□□□ 1.07
ATN1P54259 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.72■■□□□ 1.07
ATN1P54259 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.72■■□□□ 1.07
ATN1P54259 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ATN1P54259 AL023803.3-201ENST00000615559 522 ntBASIC21.72■■□□□ 1.07
ATN1P54259 AL691432.3-201ENST00000621860 400 ntBASIC21.72■■□□□ 1.07
ATN1P54259 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATN1P54259 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.72■■□□□ 1.07
ATN1P54259 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.72■■□□□ 1.07
ATN1P54259 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATN1P54259 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATN1P54259 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATN1P54259 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATN1P54259 AC005229.4-201ENST00000610085 2198 ntBASIC21.71■■□□□ 1.07
ATN1P54259 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.71■■□□□ 1.07
ATN1P54259 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 TSPY17P-201ENST00000450329 467 ntBASIC21.71■■□□□ 1.07
ATN1P54259 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.71■■□□□ 1.07
ATN1P54259 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
ATN1P54259 DPP3P2-201ENST00000416030 1696 ntBASIC21.71■■□□□ 1.07
ATN1P54259 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
ATN1P54259 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATN1P54259 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.7■■□□□ 1.06
ATN1P54259 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 AL049796.1-201ENST00000565336 1766 ntBASIC21.7■■□□□ 1.06
ATN1P54259 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.7■■□□□ 1.06
ATN1P54259 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.7■■□□□ 1.06
ATN1P54259 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.7■■□□□ 1.06
ATN1P54259 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.7■■□□□ 1.06
ATN1P54259 VENTXP5-201ENST00000523979 775 ntBASIC21.7■■□□□ 1.06
ATN1P54259 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATN1P54259 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATN1P54259 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATN1P54259 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATN1P54259 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ATN1P54259 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATN1P54259 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATN1P54259 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ATN1P54259 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms