Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 INGX-201ENST00000359239 846 ntBASIC20.74■□□□□ 0.91
CLCN4P51793 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN4P51793 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN4P51793 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN4P51793 AC087388.1-201ENST00000571370 1112 ntBASIC20.74■□□□□ 0.91
CLCN4P51793 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CLCN4P51793 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN4P51793 FAM87A-204ENST00000613235 858 ntBASIC20.74■□□□□ 0.91
CLCN4P51793 PHGDH-210ENST00000641115 1638 ntBASIC20.74■□□□□ 0.91
CLCN4P51793 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN4P51793 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN4P51793 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN4P51793 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN4P51793 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 AP000692.2-201ENST00000608391 879 ntBASIC20.73■□□□□ 0.91
CLCN4P51793 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN4P51793 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLCN4P51793 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
CLCN4P51793 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN4P51793 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN4P51793 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 RCC2P6-201ENST00000526625 1557 ntBASIC20.72■□□□□ 0.91
CLCN4P51793 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN4P51793 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN4P51793 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN4P51793 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.72■□□□□ 0.91
CLCN4P51793 SLC25A1P4-201ENST00000567977 778 ntBASIC20.72■□□□□ 0.91
CLCN4P51793 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN4P51793 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN4P51793 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CLCN4P51793 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLCN4P51793 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLCN4P51793 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN4P51793 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN4P51793 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 HLA-A-209ENST00000638375 975 ntBASIC20.71■□□□□ 0.91
CLCN4P51793 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN4P51793 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN4P51793 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN4P51793 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CLCN4P51793 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLCN4P51793 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
CLCN4P51793 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLCN4P51793 AC008040.2-201ENST00000461049 708 ntBASIC20.7■□□□□ 0.9
CLCN4P51793 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN4P51793 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLCN4P51793 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN4P51793 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN4P51793 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 AC011298.2-201ENST00000617989 482 ntBASIC20.7■□□□□ 0.9
CLCN4P51793 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLCN4P51793 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLCN4P51793 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CLCN4P51793 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms