Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.27■□□□□ 0.36
CX3CR1P49238 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 CROCCP5-201ENST00000436658 830 ntBASIC17.27■□□□□ 0.36
CX3CR1P49238 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CX3CR1P49238 AC006970.2-201ENST00000450065 779 ntBASIC17.27■□□□□ 0.36
CX3CR1P49238 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.27■□□□□ 0.36
CX3CR1P49238 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.27■□□□□ 0.36
CX3CR1P49238 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CX3CR1P49238 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.27■□□□□ 0.36
CX3CR1P49238 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CX3CR1P49238 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CX3CR1P49238 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CX3CR1P49238 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CX3CR1P49238 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CX3CR1P49238 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.26■□□□□ 0.35
CX3CR1P49238 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CX3CR1P49238 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CX3CR1P49238 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CX3CR1P49238 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.26■□□□□ 0.35
CX3CR1P49238 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CX3CR1P49238 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.26■□□□□ 0.35
CX3CR1P49238 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CX3CR1P49238 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.26■□□□□ 0.35
CX3CR1P49238 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CX3CR1P49238 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CX3CR1P49238 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.25■□□□□ 0.35
CX3CR1P49238 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.25■□□□□ 0.35
CX3CR1P49238 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.25■□□□□ 0.35
CX3CR1P49238 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
CX3CR1P49238 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
CX3CR1P49238 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.25■□□□□ 0.35
CX3CR1P49238 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
CX3CR1P49238 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CX3CR1P49238 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.24■□□□□ 0.35
CX3CR1P49238 AL121832.2-201ENST00000610979 668 ntBASIC17.24■□□□□ 0.35
CX3CR1P49238 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CX3CR1P49238 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.24■□□□□ 0.35
CX3CR1P49238 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
CX3CR1P49238 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CX3CR1P49238 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CR1P49238 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CX3CR1P49238 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms