Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.33■□□□□ 0.69
SLC1A6P48664 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A6P48664 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC1A6P48664 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.33■□□□□ 0.68
SLC1A6P48664 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SLC1A6P48664 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC1A6P48664 AL162412.1-201ENST00000567129 965 ntBASIC19.33■□□□□ 0.68
SLC1A6P48664 KRT18P61-201ENST00000585825 1298 ntBASIC19.33■□□□□ 0.68
SLC1A6P48664 AC010536.3-201ENST00000620306 533 ntBASIC19.33■□□□□ 0.68
SLC1A6P48664 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC1A6P48664 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC1A6P48664 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SLC1A6P48664 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC1A6P48664 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC1A6P48664 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC1A6P48664 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC1A6P48664 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.32■□□□□ 0.68
SLC1A6P48664 PHGDH-210ENST00000641115 1638 ntBASIC19.32■□□□□ 0.68
SLC1A6P48664 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC1A6P48664 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC1A6P48664 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC1A6P48664 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC1A6P48664 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.31■□□□□ 0.68
SLC1A6P48664 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC1A6P48664 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC1A6P48664 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 HLA-G-202ENST00000376815 851 ntBASIC19.3■□□□□ 0.68
SLC1A6P48664 HLA-G-203ENST00000376818 1127 ntBASIC19.3■□□□□ 0.68
SLC1A6P48664 MCRIP2P1-201ENST00000394346 511 ntBASIC19.3■□□□□ 0.68
SLC1A6P48664 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A6P48664 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SLC1A6P48664 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC1A6P48664 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC1A6P48664 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC1A6P48664 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 CROCCP3-202ENST00000420820 1947 ntBASIC19.29■□□□□ 0.68
SLC1A6P48664 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A6P48664 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A6P48664 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SLC1A6P48664 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SLC1A6P48664 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC1A6P48664 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLC1A6P48664 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A6P48664 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms