Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
ALDH1A3P47895 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ALDH1A3P47895 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.8■□□□□ 0.92
ALDH1A3P47895 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 SMG8-203ENST00000578922 2178 ntBASIC20.8■□□□□ 0.92
ALDH1A3P47895 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALDH1A3P47895 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALDH1A3P47895 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.79■□□□□ 0.92
ALDH1A3P47895 KRT16P1-201ENST00000399124 1418 ntBASIC20.78■□□□□ 0.92
ALDH1A3P47895 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 PHGDH-210ENST00000641115 1638 ntBASIC20.78■□□□□ 0.92
ALDH1A3P47895 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 MMP23A-201ENST00000234610 1017 ntBASIC20.78■□□□□ 0.92
ALDH1A3P47895 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 YBX1P10-201ENST00000444752 975 ntBASIC20.78■□□□□ 0.92
ALDH1A3P47895 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALDH1A3P47895 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ALDH1A3P47895 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
ALDH1A3P47895 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALDH1A3P47895 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALDH1A3P47895 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
ALDH1A3P47895 AL157384.1-201ENST00000445995 2473 ntBASIC20.77■□□□□ 0.91
ALDH1A3P47895 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 UNC93B2-201ENST00000285383 730 ntBASIC20.76■□□□□ 0.91
ALDH1A3P47895 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 FAM210CP-201ENST00000445714 574 ntBASIC20.76■□□□□ 0.91
ALDH1A3P47895 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALDH1A3P47895 REXO1L10P-201ENST00000615707 1290 ntBASIC20.76■□□□□ 0.91
ALDH1A3P47895 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ALDH1A3P47895 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A3P47895 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A3P47895 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.75■□□□□ 0.91
ALDH1A3P47895 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ALDH1A3P47895 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.75■□□□□ 0.91
ALDH1A3P47895 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A3P47895 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A3P47895 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ALDH1A3P47895 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms