Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 AL162377.1-201ENST00000618844 1793 ntBASIC20.97■□□□□ 0.95
BRCC3P46736 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRCC3P46736 AL691432.2-201ENST00000607222 2038 ntBASIC20.97■□□□□ 0.95
BRCC3P46736 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.96■□□□□ 0.95
BRCC3P46736 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.96■□□□□ 0.95
BRCC3P46736 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 MIR1238-201ENST00000408483 83 ntBASIC20.96■□□□□ 0.95
BRCC3P46736 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.96■□□□□ 0.95
BRCC3P46736 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.96■□□□□ 0.95
BRCC3P46736 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 AC097493.4-201ENST00000641197 219 ntBASIC20.96■□□□□ 0.95
BRCC3P46736 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.96■□□□□ 0.95
BRCC3P46736 GABARAPL3-202ENST00000624044 1851 ntBASIC20.96■□□□□ 0.95
BRCC3P46736 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCC3P46736 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
BRCC3P46736 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
BRCC3P46736 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.95■□□□□ 0.94
BRCC3P46736 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BRCC3P46736 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.95■□□□□ 0.94
BRCC3P46736 MESTP1-201ENST00000404287 994 ntBASIC20.95■□□□□ 0.94
BRCC3P46736 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 KRT18P21-201ENST00000515767 1272 ntBASIC20.95■□□□□ 0.94
BRCC3P46736 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.95■□□□□ 0.94
BRCC3P46736 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.95■□□□□ 0.94
BRCC3P46736 AL031985.4-201ENST00000642138 673 ntBASIC20.95■□□□□ 0.94
BRCC3P46736 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.95■□□□□ 0.94
BRCC3P46736 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRCC3P46736 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BRCC3P46736 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.94■□□□□ 0.94
BRCC3P46736 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BRCC3P46736 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.94■□□□□ 0.94
BRCC3P46736 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 AC004980.1-204ENST00000429707 299 ntBASIC20.94■□□□□ 0.94
BRCC3P46736 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.94■□□□□ 0.94
BRCC3P46736 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.94■□□□□ 0.94
BRCC3P46736 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.94■□□□□ 0.94
BRCC3P46736 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.94■□□□□ 0.94
BRCC3P46736 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BRCC3P46736 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRCC3P46736 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 FAM210CP-201ENST00000445714 574 ntBASIC20.93■□□□□ 0.94
BRCC3P46736 AC011506.1-201ENST00000474329 610 ntBASIC20.93■□□□□ 0.94
BRCC3P46736 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.93■□□□□ 0.94
BRCC3P46736 HLA-A-209ENST00000638375 975 ntBASIC20.93■□□□□ 0.94
BRCC3P46736 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRCC3P46736 AP001271.2-201ENST00000624018 1556 ntBASIC20.93■□□□□ 0.94
BRCC3P46736 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.93■□□□□ 0.94
BRCC3P46736 AL157384.1-201ENST00000445995 2473 ntBASIC20.93■□□□□ 0.94
BRCC3P46736 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRCC3P46736 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms