Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CTSKP43235 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.58■□□□□ 0.73
CTSKP43235 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTSKP43235 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSKP43235 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.58■□□□□ 0.72
CTSKP43235 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.58■□□□□ 0.72
CTSKP43235 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTSKP43235 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.58■□□□□ 0.72
CTSKP43235 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.58■□□□□ 0.72
CTSKP43235 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.58■□□□□ 0.72
CTSKP43235 CR392000.1-201ENST00000624770 1228 ntBASIC19.58■□□□□ 0.72
CTSKP43235 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CTSKP43235 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.57■□□□□ 0.72
CTSKP43235 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CTSKP43235 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.57■□□□□ 0.72
CTSKP43235 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CTSKP43235 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.57■□□□□ 0.72
CTSKP43235 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 KRT18P35-201ENST00000510488 1269 ntBASIC19.57■□□□□ 0.72
CTSKP43235 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.57■□□□□ 0.72
CTSKP43235 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTSKP43235 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.57■□□□□ 0.72
CTSKP43235 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTSKP43235 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTSKP43235 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSKP43235 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSKP43235 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CTSKP43235 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.56■□□□□ 0.72
CTSKP43235 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CTSKP43235 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSKP43235 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.56■□□□□ 0.72
CTSKP43235 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.56■□□□□ 0.72
CTSKP43235 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTSKP43235 FITM1-202ENST00000559294 800 ntBASIC19.56■□□□□ 0.72
CTSKP43235 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.56■□□□□ 0.72
CTSKP43235 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.56■□□□□ 0.72
CTSKP43235 KRT16P1-201ENST00000399124 1418 ntBASIC19.56■□□□□ 0.72
CTSKP43235 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.55■□□□□ 0.72
CTSKP43235 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSKP43235 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTSKP43235 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSKP43235 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 AC005521.1-201ENST00000393351 872 ntBASIC19.55■□□□□ 0.72
CTSKP43235 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSKP43235 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSKP43235 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSKP43235 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.55■□□□□ 0.72
CTSKP43235 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.55■□□□□ 0.72
CTSKP43235 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.55■□□□□ 0.72
CTSKP43235 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.55■□□□□ 0.72
CTSKP43235 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.55■□□□□ 0.72
CTSKP43235 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 LINC01568-207ENST00000641790 1380 ntBASIC19.55■□□□□ 0.72
CTSKP43235 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTSKP43235 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTSKP43235 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSKP43235 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
CTSKP43235 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CTSKP43235 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSKP43235 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSKP43235 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.54■□□□□ 0.72
CTSKP43235 AL390955.1-201ENST00000428694 934 ntBASIC19.54■□□□□ 0.72
CTSKP43235 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.54■□□□□ 0.72
CTSKP43235 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSKP43235 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.54■□□□□ 0.72
CTSKP43235 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTSKP43235 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTSKP43235 NAPSB-206ENST00000562112 1266 ntBASIC19.54■□□□□ 0.72
CTSKP43235 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.54■□□□□ 0.72
CTSKP43235 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.54■□□□□ 0.72
CTSKP43235 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTSKP43235 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms