Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.77■□□□□ 0.76
CCNFP41002 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNFP41002 KRT8P17-201ENST00000453110 1448 ntBASIC19.77■□□□□ 0.76
CCNFP41002 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.77■□□□□ 0.76
CCNFP41002 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNFP41002 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 GUSBP6-202ENST00000438529 1198 ntBASIC19.77■□□□□ 0.76
CCNFP41002 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.77■□□□□ 0.76
CCNFP41002 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.77■□□□□ 0.76
CCNFP41002 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 AL109923.1-201ENST00000618799 583 ntBASIC19.77■□□□□ 0.76
CCNFP41002 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
CCNFP41002 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.77■□□□□ 0.76
CCNFP41002 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNFP41002 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNFP41002 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNFP41002 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CCNFP41002 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.77■□□□□ 0.75
CCNFP41002 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNFP41002 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCNFP41002 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 LETM1P2-201ENST00000597330 2178 ntBASIC19.76■□□□□ 0.75
CCNFP41002 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNFP41002 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCNFP41002 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 MIPEPP3-201ENST00000412105 444 ntBASIC19.76■□□□□ 0.75
CCNFP41002 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNFP41002 KRT17P1-201ENST00000399211 1546 ntBASIC19.76■□□□□ 0.75
CCNFP41002 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCNFP41002 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 AC093503.3-201ENST00000624917 2352 ntBASIC19.75■□□□□ 0.75
CCNFP41002 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.75■□□□□ 0.75
CCNFP41002 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNFP41002 MIR4758-201ENST00000577688 71 ntBASIC19.75■□□□□ 0.75
CCNFP41002 AL031963.3-201ENST00000606441 850 ntBASIC19.75■□□□□ 0.75
CCNFP41002 AC092118.2-201ENST00000613495 667 ntBASIC19.75■□□□□ 0.75
CCNFP41002 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCNFP41002 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 AL032819.2-201ENST00000624543 2162 ntBASIC19.75■□□□□ 0.75
CCNFP41002 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.75■□□□□ 0.75
CCNFP41002 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.75■□□□□ 0.75
CCNFP41002 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNFP41002 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNFP41002 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 AP001271.2-201ENST00000624018 1556 ntBASIC19.74■□□□□ 0.75
CCNFP41002 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CCNFP41002 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCNFP41002 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.74■□□□□ 0.75
CCNFP41002 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.74■□□□□ 0.75
CCNFP41002 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.74■□□□□ 0.75
CCNFP41002 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNFP41002 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNFP41002 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.74■□□□□ 0.75
CCNFP41002 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNFP41002 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCNFP41002 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCNFP41002 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 KRT16P6-202ENST00000425692 1426 ntBASIC19.74■□□□□ 0.75
CCNFP41002 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCNFP41002 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms