Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.62■□□□□ 0.73
HMGCLP35914 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGCLP35914 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLP35914 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HMGCLP35914 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLP35914 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 AC133681.1-201ENST00000465482 601 ntBASIC19.61■□□□□ 0.73
HMGCLP35914 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.61■□□□□ 0.73
HMGCLP35914 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLP35914 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLP35914 AL023875.1-201ENST00000640777 796 ntBASIC19.61■□□□□ 0.73
HMGCLP35914 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HMGCLP35914 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLP35914 NBPF21P-201ENST00000425093 1451 ntBASIC19.6■□□□□ 0.73
HMGCLP35914 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGCLP35914 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HMGCLP35914 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCLP35914 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HMGCLP35914 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCLP35914 AC239809.2-201ENST00000415381 517 ntBASIC19.6■□□□□ 0.73
HMGCLP35914 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCLP35914 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMGCLP35914 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCLP35914 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCLP35914 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HMGCLP35914 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCLP35914 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
HMGCLP35914 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HMGCLP35914 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLP35914 TREX1-205ENST00000625293 1783 ntBASIC19.6■□□□□ 0.73
HMGCLP35914 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLP35914 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLP35914 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLP35914 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HMGCLP35914 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCLP35914 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCLP35914 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 AC124016.1-201ENST00000609552 612 ntBASIC19.59■□□□□ 0.73
HMGCLP35914 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.59■□□□□ 0.73
HMGCLP35914 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
HMGCLP35914 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLP35914 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLP35914 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLP35914 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
HMGCLP35914 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLP35914 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLP35914 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLP35914 PRORSD1P-201ENST00000295112 541 ntBASIC19.58■□□□□ 0.72
HMGCLP35914 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms