Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHKAP35790 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHKAP35790 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CHKAP35790 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
CHKAP35790 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.76■□□□□ 0.91
CHKAP35790 AC233263.1-201ENST00000578059 224 ntBASIC20.76■□□□□ 0.91
CHKAP35790 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHKAP35790 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHKAP35790 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.76■□□□□ 0.91
CHKAP35790 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHKAP35790 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.76■□□□□ 0.91
CHKAP35790 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHKAP35790 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.75■□□□□ 0.91
CHKAP35790 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CHKAP35790 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHKAP35790 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.75■□□□□ 0.91
CHKAP35790 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHKAP35790 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHKAP35790 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.74■□□□□ 0.91
CHKAP35790 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CHKAP35790 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHKAP35790 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 HLA-G-202ENST00000376815 851 ntBASIC20.74■□□□□ 0.91
CHKAP35790 HLA-G-203ENST00000376818 1127 ntBASIC20.74■□□□□ 0.91
CHKAP35790 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.74■□□□□ 0.91
CHKAP35790 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.74■□□□□ 0.91
CHKAP35790 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.74■□□□□ 0.91
CHKAP35790 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHKAP35790 MTDHP1-201ENST00000605323 784 ntBASIC20.74■□□□□ 0.91
CHKAP35790 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.74■□□□□ 0.91
CHKAP35790 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHKAP35790 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
CHKAP35790 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.73■□□□□ 0.91
CHKAP35790 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CHKAP35790 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.73■□□□□ 0.91
CHKAP35790 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.73■□□□□ 0.91
CHKAP35790 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.73■□□□□ 0.91
CHKAP35790 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.73■□□□□ 0.91
CHKAP35790 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.73■□□□□ 0.91
CHKAP35790 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHKAP35790 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.73■□□□□ 0.91
CHKAP35790 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHKAP35790 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.72■□□□□ 0.91
CHKAP35790 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.72■□□□□ 0.91
CHKAP35790 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.72■□□□□ 0.91
CHKAP35790 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.72■□□□□ 0.91
CHKAP35790 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.72■□□□□ 0.91
CHKAP35790 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.72■□□□□ 0.91
CHKAP35790 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.72■□□□□ 0.91
CHKAP35790 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.72■□□□□ 0.91
CHKAP35790 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.72■□□□□ 0.91
CHKAP35790 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHKAP35790 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHKAP35790 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms